Difference between revisions of "Tutorials"

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== AMBER Tutorials ==  
 
== AMBER Tutorials ==  
  
[ http://ambermd.org/tutorials/advanced/tutorial9/ An AMBER tutorial for free energy calculations]
+
[http://ambermd.org/tutorials/advanced/tutorial9/ An AMBER tutorial for free energy calculations]
 
== CHARMM Tutorials ==
 
== CHARMM Tutorials ==

Revision as of 12:57, 18 June 2013

GROMACS Tutorials

A very useful tutorial for calculating free energies in GROMACS 4.5.3 by Justin Lemkul.

For tutorial for earlier versions of Gromacs, see our original tutorial on methane insertion in water.

For tutorials for 4.6.2 versions of GROMACS, see instructions on how to run this calculation with GROMACS 4.6 using standard free energy calculations, or using using expanded ensemble simulations.

AMBER Tutorials

An AMBER tutorial for free energy calculations

CHARMM Tutorials